Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MKKLATVGSLIVTSTLVFSSMP-----FQNAHADTTSMNVPNKQSQNVQ------NHRPYGGVVPQGMTQAQYTELEKTLPQLS----AGSNMQDYNMKLYDATQNIADKYNV---IITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDA--------------NGVNHGGS---EMVQNKTGHMSQQ-----------------DHMNQ--NTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLF-------LAFRRRSTNK----------------------- |
| 4OCV Chain:A ((24-378)) | TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGF-VGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVADVMETT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22943 for 1587 contacts (14.5/contact) +
2D Compatibility (PS) -24642 + (NN) -3921 + (LL) -80
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -11600.0 ( -7.31 by residue)
QMean score : ?
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