Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---METIKQEVRESIVKG---IIAGYKDYVNERNEVKKRMVISDAYAFTKS-NHIESQVAKHLEN--FVKYIKENAGPSWKYLKFIFNKDEEKNNI--MFILKNEDYFDEKNVSV---GKSLVADK-NPKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIV---EREDYHIDEEELEVLKND------GELELIDVEHAFGISIDEGNDMI------ESER--------------------------------------------------------------- |
| 4WWX Chain:X ((1-349)) | SLQMVTVGHNIAL-IQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAIFSKDSCYLPPLRYPATCSYKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKVTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEK------WNSVADCLPHVFLIDFEFG------CATSYILPELQDGLSFHVSIARN--DTVYILGGHSLASNIRPANLYRIRVDLPPAVNCTVLPISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGAMSEAFYFYTLRC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 67365 for 1269 contacts (53.1/contact) +
2D Compatibility (PS) -23699 + (NN) 6443 + (LL) 1552
1D Compatibility (HY) 6800 + (ID) 750
Total energy: 57711.0 ( 45.48 by residue)
QMean score : 0.096
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