Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSH-----HLHPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILNDIDRKV--------ITGI----------NDSRYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHP----------ERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKI--RKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL |
2YXO Chain:A ((1-263)) | MVDSHVHT----PLCGHAEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQ-DLYVGIGLEADFHPGTEGFLAQLLRRYPFDYVIGSVHYLGAWPLDHPDHQEEYAWRDLKEVFRAYFQEVEKAARSGLFHAIGHLDLPKKFGHRLPEEALLELAEPALRAVAEAGLFLDVNTAGLRRPAKEVYPAPALLRRARELGIGLVLGSDAHR-------------PEEVGFAFPEVQALLAGLGF--------REAYYFVEGSPVAYPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62512 for 1785 contacts (-35.0/contact) +
2D Compatibility (PS) -24262 + (NN) -6607 + (LL) 1812
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -100369.0 ( -56.23 by residue)
QMean score : 0.320
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