Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNRR---LENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVLLMVYLSNYKKANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYKKEANVITNAPILNDSREFKEIENFKEIVYQGQIVMDRGYEEFIIASSAFKQ--NAPSFIIRGFGPHE-EVIKELIS--YNS--------ENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPV-KEHIYLNEKY-KFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF |
| 2XCI Chain:A ((41-372)) | -GALWVHTASIGEFNTFLPILKELKR-EHRILLTYFSPRAREYLKTKSDFYDCL-HPLPL------------D----NPFSVKRFEELSKPKALIVVEREFWP-SLIIF-TKVPKILVNAYAKG---------------SLIEKILSK-KFDLIIMRTQEDVEKFKTFGA-KRVFSCGNLKFICQKG-KGIKLKGE-FIVAGSI-HTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDR--FGILKELYPVGKIAIVGG-----TFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSVKK-EIKVEEKSREIK-----GCYLEKLREFLR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80447 for 2571 contacts (-31.3/contact) +
2D Compatibility (PS) -33445 + (NN) -4795 + (LL) 4840
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -123547.0 ( -48.05 by residue)
QMean score : 0.408
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