Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVY--KNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAY-----REQYDKILLYSGNMGQLQDMETLISFLKLNKD--QPQTLTILCGHGKKFADVKTAIEDHRI-ENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQ-IDNGDAHAIYNFINTH--SSKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 2IW1 Chain:A ((2-368)) | ----IVAFCLYKYFP-FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC----------PKAFELIQVPVKSHTN---HGRN---A-EYYAWVQNHLKEHPADRVVGFNKMPG--LDVYFAADVCYAEKVAQEKGFLYRL-T--------SR-YRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQT-EPERFQILPPGIYPDRKYSEQIPN-SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIV----LLEAITAGLPVLTTA--VCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYAD-TQDLYSLPEKAADII- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216786 for 2952 contacts (-73.4/contact) +
2D Compatibility (PS) -37646 + (NN) -10571 + (LL) 1896
1D Compatibility (HY) -2000 + (ID) 2350
Total energy: -267457.0 ( -90.60 by residue)
QMean score : 0.388
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