Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLETLIKEQLDPHLVEVDEGTYYPRTFIQQLFVDGYFGEA----------ALRKNAEVIEAVSQSCLTTGFCLWCQLAFSTYLENATQPHLNNDLQQQLLSGEILGATGLSNPMKSFNDLEKLNLEHTYVDGQLVVSGRMPAVSNIQEDHYFGAISKHESSDEFVMFILRANQDGITLVEKTNFLGVNGSATYQITLNQVVVPQSQIITHDAKQFAA---TIRPQFIAYQIPIGLGSIKSSLELIDAFSNAQNGI------NQYLEYDVEAFKKRYRQLREEYYAILD-DGNLTSHLSELISLKKDIGYLLLDVNQASVVNGGSRAYTPYSPQVRKLKEGFFFAALTPTLRHLGKLEAELKG |
| 1R2J Chain:A ((4-360)) | --RDALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQRLGDAGQRATFLKELTSG--LAAVGFSERQ-AGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED-GSGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDH------MVPATILAKHVAAERAAAGAATAAQVLASAGA--GHVVERAYRDAKLMEIIEGSSEMCRVMLAQH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165977 for 2934 contacts (-56.6/contact) +
2D Compatibility (PS) -35302 + (NN) -14953 + (LL) 280
1D Compatibility (HY) 3200 + (ID) 2200
Total energy: -214952.0 ( -73.26 by residue)
QMean score : 0.379
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