Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKVGIVGGSGYGAIELIRLLQT--HPHVTIAHIYSHSKVDEPLKLTFPHLQHIMQHFEALT-VDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIKNREIYEAYYKETAAAQDDLNHAIYSISEWQSFDNN---GTKLISNPGCFPTATLLALHPLISEKIVDLSSIIIDAKTGVSGAGRSLSQRVHFS-----------------------------EMNENLSAYAIG---NHKHKPEI----EQYLSIIAGQ-DVSVIFTPHLVPMTRGILSTIYVKFSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGI-YVDE---TTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGLNQSPVYP |
| 3TZ6 Chain:A ((1-342)) | GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAF--RGQE-I--EVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPD-------------------VPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARL--VRLVVSSYQAVSGSGLAGVAE-LAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGAT----GVQLVD---VPTPLAAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTA-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -221705 for 2598 contacts (-85.3/contact) +
2D Compatibility (PS) -31565 + (NN) -6816 + (LL) 3120
1D Compatibility (HY) -2800 + (ID) 3500
Total energy: -263266.0 ( -101.33 by residue)
QMean score : 0.456
|
|
|