Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVDQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIYNSISNPLHSQNN
2LCH Chain:A ((1-113))
MGSHQEYIKKVTDELKELIQNVNDDIKEVEKNPED-MEYWNKIYRLVHTMKEITETMGFSSVAKVLHTIMNLVDKMLNSEIKITSDLIDKVKKKLDMVTRELDKKVSGSYLVPR
General information:
TITO was launched using:
RESULT:
Template:
2LCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3370 for 732 contacts (-4.6/contact) +
2D Compatibility (PS) -12181 + (NN) -6927 + (LL) 44
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -24034.0 ( -32.83 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2LCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LCH-query.scw
PDB file :
Tito_Scwrl_2LCH.pdb
: