Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWSFKSMFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSK--DRDAIKAMFKKWTVMADRMMDGDTVGKTSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFKDLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGKETPRNLMAFKDGTINPRKSNQLKDYVFID--DGWAKHGTYCVVRRIQIHIETWDRTALEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEA-----NTSILRRAFNYVDGTDDRTGNFETGLLFIAFQKATKQFIDIQNNLGS------NDKLNEYITHRGSASFLVLPGVSKGGYLGETLFD |
| 3QNS Chain:A ((10-316)) | ---------------------RLAPQAV-LTPPSAASLFLVLVAGDSDDDRATVCDVISGIDGPLKAVGFREL----------------------AGSLSCVVGVGAQFWDRVS-ASSKPAHLHPFVPLSGPVHSAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFD----SRDLLGFVDGTENPTDDD-AADSALIGDEDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDD-----------D------AQPSNSHVTLNTIVDDDGVEHDILRDNMAFGSLGE-----AEYGTYFIGYAKDPAVTELMLRRMFLGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QNS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104612 for 2453 contacts (-42.6/contact) +
2D Compatibility (PS) -30971 + (NN) -9472 + (LL) 2544
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -155261.0 ( -63.29 by residue)
QMean score : 0.373
|
|
|