Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MDNNEKEKSKSELLVV---TGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS------LRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMD-ADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAE----RLGNYLNEVFEYNVYVHHRDAHIESGEKK |
| 4P0P Chain:B ((62-389)) | RMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAV--PCSVTWRRRAGPSEDREDWVEEPTVLVLLR----AEAFVSMIDNGKTLQGFVTDITAKTAG-KALSLVIVDQEKCFVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQ----------LNRVSLEMASAVVNAYPS----------PQLLVQAYQQ-----------CFSDKERQNLLADIQVRRTSRRIGPELSRRIYLQMTTLQPHLSL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44918 for 1742 contacts (-25.8/contact) +
2D Compatibility (PS) -27638 + (NN) -4999 + (LL) 3016
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -85739.0 ( -49.22 by residue)
QMean score : 0.236
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