Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
3DMU Chain:A ((7-141))
-------------------------------------------------------------------------------------LHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTP---------EKYGPEASAFKKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
3DMU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47483 for 1012 contacts (-46.9/contact) +
2D Compatibility (PS) -13472 + (NN) -1637 + (LL) 6240
1D Compatibility (HY) -16000 + (ID) 6100
Total energy: -78452.0 ( -77.52 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3DMU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DMU-query.scw
PDB file :
Tito_Scwrl_3DMU.pdb
: