Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
3L78 Chain:A ((1-115))
MVTLFLSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVD--ELSVSELINLISKNPSLLRRPIIMDNKRMQIGFNEDEIRAFLP-
General information:
TITO was launched using:
RESULT:
Template:
3L78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49212 for 834 contacts (-59.0/contact) +
2D Compatibility (PS) -12252 + (NN) -1427 + (LL) 440
1D Compatibility (HY) -9600 + (ID) 1350
Total energy: -73401.0 ( -88.01 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_3L78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L78-query.scw
PDB file :
Tito_Scwrl_3L78.pdb
: