Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQV-IAEPVNIICTHGTMS--IDKLDDMIESL-YDKQVFVLADSDDEGDRIRNWFKRYLSE--SEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
1Q57 Chain:A ((150-237))
---GKKIVVTEGEIDMLTVMELQDC-KYPVVSLGHGASAAKKTCAANYEYFDQFEQIILMFDMDEAGRKAVEEAAQVLPAGKVRVAVLP---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30297 for 533 contacts (-56.8/contact) +
2D Compatibility (PS) -8720 + (NN) 109 + (LL) 3656
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -38652.0 ( -72.52 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1Q57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q57-query.scw
PDB file :
Tito_Scwrl_1Q57.pdb
: