Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNNAFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISAIVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQPKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVDPKELK-AQQKREKAEIKAKKKEKRKAYNQRMKERRKNQPSAVSQRRMNFEERRQIYNNDISEERNSSEVKDKKEQE |
1BMF Chain:G ((1-272)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYLCGAIHSSVAKQMKLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 73818 for 713 contacts (103.5/contact) +
2D Compatibility (PS) -13360 + (NN) -3467 + (LL) 19692
1D Compatibility (HY) 0 + (ID) 700
Total energy: 75983.0 ( 106.57 by residue)
QMean score : 0.251
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