Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEE---------------VLDTQMFGLQKEVDFA----------------VKLGLVDREDGKQIMLRLE----KELSKLHEAFTLV
4II1 Chain:A ((26-167))
EELSGTKVSAPYYTLEYHNAMVVGTEEAGSAGVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAGSACLAKHQDGLWHAARITDVDNGYYTVKFDSLLLREAVVEGDGILPP
General information:
TITO was launched using:
RESULT:
Template:
4II1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14659 for 471 contacts (-31.1/contact) +
2D Compatibility (PS) -9083 + (NN) 4493 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -21749.0 ( -46.18 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_4II1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4II1-query.scw
PDB file :
Tito_Scwrl_4II1.pdb
: