Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHLLSMEHLSTDQIYKLIQKASQFKSGERQLPNF-EGKYVANLFFENSTRTKCSFEMAELKLGLKTISFETS--TSSVSKGESLYDTCKTLESIGCDLLVIRHPFNNYYEKLAN--INIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSRVARSNYHSLKAL-GANVMFNSPNA-----WIDDSLE------APYVNIDDVIETVDIVMLLRIQHERHGLAEETRFAADDYHQKHG--LNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQMENGVYLRMAVIDELLK |
| 2BE7 Chain:C ((25-316)) | --HIVSINDISRNELELIVKTAAKLK--EQPQPELLKNKVIASCFFEASTRTRLSFETAIQRLGGSVIGFDNAGNTSLAKKGETLADSISVISSY-ADAFVMRHP-QEGAARLASEFSNVPVINGGDGSNQHPTQTLLDLFSIYETQGRLDNLNIAFVGDLKYGRTVHSLAQALAKFDGCKFHFIAPDALAMPEYICDELDEQNISYATYASIEEVVPEIDVLYMTRVQKERF---DETEYQ----HMKAGFILSASSLVHAKPNLKVLHPLP--RVDEIATDVDKTPYAYYFQQAENGVYAREALL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158006 for 2240 contacts (-70.5/contact) +
2D Compatibility (PS) -29443 + (NN) -8381 + (LL) 676
1D Compatibility (HY) -17200 + (ID) 5300
Total energy: -217654.0 ( -97.17 by residue)
QMean score : 0.472
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