Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKE--NECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELHEQDSLQNKLFPLEY-GLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
1SGV Chain:A ((5-282)) | -GPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAK--HLTIEAIDAAMERLRGEI----------------------------LEARPIRIDRFELLAAR---RRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQARSLDDLAERP------ALSLSLDEACLLMFARRDLTAAE-ASAAANGRSLPAVGI-----DGVYAACDADGRVIALLRDEGS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126659 for 1925 contacts (-65.8/contact) +
2D Compatibility (PS) -26239 + (NN) -4380 + (LL) 3700
1D Compatibility (HY) -14000 + (ID) 3550
Total energy: -171128.0 ( -88.90 by residue)
QMean score : 0.489
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