Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEIETIISEIEKLL--TNNTPYSISKNSGVPRQTVTDLKVGKTKIKEAKFKTIIKLYEYQRTLENKTEC
2L49 Chain:A ((4-59))
-----TISEKIVLMRKSEYLSRQQLADLTGVPYGTLSYYESGR---STPPTDVMMNILQTPQFT------
General information:
TITO was launched using:
RESULT:
Template:
2L49.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7905 for 340 contacts (-23.2/contact) +
2D Compatibility (PS) -5644 + (NN) -274 + (LL) 1160
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -14663.0 ( -43.13 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_2L49.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L49-query.scw
PDB file :
Tito_Scwrl_2L49.pdb
: