Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAI-TNKYL-SELIDMPTKPGVIVSDTGSTKAMIQQHESNLLKHNIHLVSGHPMA-GSHKSGVL-NAKKHLFENAYYILVYNEP-RNEQAA--------NTLKELLSPTLAKF-IVTTAEEH--DYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRD---------------------------------ALPAKQLGGLNTAYDLYVDIPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ |
| 1YGY Chain:A ((143-514)) | -KTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSPAR-AAQLGIE---LLSLDDLLARADFISVHLPKTPETAGLIDKEALA-KTKPGVIIVNAARGGLVDEAALAD------AITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALA--GEFVPDAVNVGGGVVNEEVAPWLDLV----RKLGVLAGVLSDELPV---SLSVQV--RGELAAEEVEVLRLSA------LRGLFSAVIEDAVTFVNAPALAAERGVTAEICKASESPNHRSVVDVRAVGADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDD-VRTAI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91603 for 2328 contacts (-39.3/contact) +
2D Compatibility (PS) -34151 + (NN) -10009 + (LL) 2428
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -145585.0 ( -62.54 by residue)
QMean score : 0.278
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