Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQ---IGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHFN--KIYFLRISTLPLSLGQESCVIRIVPQFFQQQ---KSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPG----IVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAILRLLEMGISV------QELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHS---------LPSSFKNLEDKLDDMTKAGVICETTMDKYI |
2EWV Chain:A ((12-351)) | -ELKILEIIKEAIELGASDIHLTAGA---PPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMS--EK--HRQKLEENGQVDFSFGVRGVGRFRANVFYQR-GSVAAALRSLPAEIPEFKKLGLPD---KVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGED-TKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLMQ----MQTMNQTLYKLYKQGLITLEDAMEA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198189 for 2368 contacts (-83.7/contact) +
2D Compatibility (PS) -33539 + (NN) -13210 + (LL) 1424
1D Compatibility (HY) -14000 + (ID) 4200
Total energy: -261714.0 ( -110.52 by residue)
QMean score : 0.413
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