Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYQPHYFQEV----RKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKP-SSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE
2FR5 Chain:C ((10-143))
--VEPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYK--DFRAIAISSDLQEEFISPCGACRQVMREF-GTDWAVYMTKPDGTFVVRTVQELLPASFGPEDLQ
General information:
TITO was launched using:
RESULT:
Template:
2FR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40536 for 979 contacts (-41.4/contact) +
2D Compatibility (PS) -14295 + (NN) -8512 + (LL) -76
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -78669.0 ( -80.36 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2FR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FR5-query.scw
PDB file :
Tito_Scwrl_2FR5.pdb
: