Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLTGKQ-KRYLRSLAHNIDPIFQIGKGGINENMIKQI-------------DDTLEN-R-ELIKVH---------VLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP------------
3CO5 Chain:A ((8-143))
GNSAAIQEMNREVEAAAKRTSPVFLTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSRNIQTGITFIIGKAERCR-VRVIASCSYAAGSDSCEEKLAGLFSESVVRIPPLS
General information:
TITO was launched using:
RESULT:
Template:
3CO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1337 for 559 contacts (-2.4/contact) +
2D Compatibility (PS) -10443 + (NN) -4915 + (LL) 176
1D Compatibility (HY) -800 + (ID) 800
Total energy: -18119.0 ( -32.41 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3CO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CO5-query.scw
PDB file :
Tito_Scwrl_3CO5.pdb
: