Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKE-LFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSK-RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDG-PILTTKIEEE |
4A6V Chain:B ((5-251)) | --IKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPT-IMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEP-QVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLR---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83189 for 2107 contacts (-39.5/contact) +
2D Compatibility (PS) -26791 + (NN) -10823 + (LL) 996
1D Compatibility (HY) -21600 + (ID) 4350
Total energy: -145757.0 ( -69.18 by residue)
QMean score : 0.571
|
|
|