Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHN-NSSNQVKEIATDKNVQGDNYRTLLPFKESQARGL-LQD-NMANSYNGGDFEDGLLNLSKEVFPT-DKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETNPEKIAEK-SPAYLS-NILEQDFYGGGDTKGKN-IKGMTIGLAMN-SVYYYKKEKDGPTFSKKLDDSEVKKQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAAD-YDENLNNNFKQFNDNLQSYFS-NFTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQ-ANKYFDKIDN-YEIRIKDGNQPRALISK-TKDDKEPQVHIYSN |
| 3MT1 Chain:A ((2-365)) | -------IETPYYLID-----------KAKLTRNMERIAHVREKSGAKALLA-----LKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNS------ISQLERFADKAAGIARGLRLNPQRLGEWDVPKVERVMDRINGFMIHNNNK----DFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYP----------VDAFSARLRAFSDRYGVQIYLE-----------PGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAGDVFG----EFRFAEELK---VGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 151482 for 2626 contacts (57.7/contact) +
2D Compatibility (PS) -34504 + (NN) -535 + (LL) 3336
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: 112029.0 ( 42.66 by residue)
QMean score : 0.091
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