Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQK--------IGVETGGELKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRKIVFNEDYDEDGVYEEKQGKQNNYVAVWFRQERRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLVDNKKSVRKYIFDSANMTNHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL |
4MNN Chain:A ((2-166)) | ---SYDYVIKEYLNAIKKGDITIQQCNGDSLFHEFKNYVNVETLNNCKKPLVKVKRGDRVYYTYY-GIPI-----------ANELWPFLNSLVRISNNVVNLDEREVELAK--------------QVRGSVKLFVTP------------------DCTKCPITAEFLYQVSQINENVKLEIYDATEY-------EEERDKYRVLSVPKIIFNDKVEIPG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15397 for 1173 contacts (13.1/contact) +
2D Compatibility (PS) -16916 + (NN) -2013 + (LL) 2228
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -8904.0 ( -7.59 by residue)
QMean score : 0.251
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