Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MDFSNF-------------------FQNLSTLKIVTSILDLLIVWYVLYLLIT---VFKGTKAIQLLKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQL-GRGSFLKRYTSNTYSKDEEKLIQSVSKAV-QYMAKRRIGALIVFEKETGL-QDYIE-------TGIAMDSNISQELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK--------- |
| 1TV8 Chain:A ((3-329)) | EQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEV-AKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139038 for 1966 contacts (-70.7/contact) +
2D Compatibility (PS) -27923 + (NN) 3774 + (LL) 204
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -168583.0 ( -85.75 by residue)
QMean score : 0.191
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