Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
3DL0 Chain:B ((1-215))
MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLDFYDEKGYLVNVNGQQDIQDVYADLKVLLGGL
General information:
TITO was launched using:
RESULT:
Template:
3DL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82825 for 1659 contacts (-49.9/contact) +
2D Compatibility (PS) -22742 + (NN) -10737 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7300
Total energy: -150004.0 ( -90.42 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3DL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL0-query.scw
PDB file :
Tito_Scwrl_3DL0.pdb
: