Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILKFDHIIHYIDQLDRFSFP--GDVIKLH----------SGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLR-TNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV |
| 4PLO Chain:B ((1-204)) | ----GADESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYG-------VGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITDVSTPMLP----PVG-VQAVALTHEAVRVSWA---------DNSVRLYTVRWRTSSA-----------KYKSEDT-----TSLSYTATGL------------------------------KPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PLO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12615 for 1203 contacts (-10.5/contact) +
2D Compatibility (PS) -18960 + (NN) 1221 + (LL) 6556
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -28298.0 ( -23.52 by residue)
QMean score : 0.228
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