Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIPKDPKRIAVVAPTYAGGLKKLGANIVAVNQQ-VD--QSKVLKD---KFKGVTKIGDGDVEKVAKEKPDLIIVYST--DKDIKKYQKVAPTVVVDYNK-HKYLEQQEMLGKIVGKEDKVKAWKKDWEETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQKLTAKAGWAEVKQEEIEKYAGDYIVSTSEGK--------PTPGYESTNMWKNLKATKEGHIVKVDAGTYWY-NDPYTLDFMRKDLKEKLIKAAK |
| 3TNY Chain:A ((17-296)) | ----------------------------EVVTVEHAMGK-TEVPANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSET-LRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKV-NQEISMVR-FMPGDVRIYHGDT--FSGVILKELGFKRPGDQNK--DDFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVIAANLLLDDIEKRFV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57169 for 2158 contacts (-26.5/contact) +
2D Compatibility (PS) -27863 + (NN) -6307 + (LL) 2788
1D Compatibility (HY) -12800 + (ID) 2900
Total energy: -104251.0 ( -48.31 by residue)
QMean score : 0.464
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