Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIRHIRNATAVIEY-----GGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIEVL-----PKDIKIYAQNEEDASEVERYG-----------F---TNVSVFND--VTHIG----EIELIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTVWFEG-VEKALKTYQPDVVVLNGGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK |
| 3MD7 Chain:A ((63-292)) | -------RASLLVERYDAEGNNTVVVIDTGPDFRMQ---------------MIDS-----GV-HMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRL-TRNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDI-------ESLGFRIG-----SVVYCTDVSAFPEQSLQYI--KDADVLIIGALQYRP---HPSHFSLGEALEWIEKLSPKRAILTHMHVPLD----YETVMR---ET--PHHVEPGYDGLRFEVA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107632 for 1566 contacts (-68.7/contact) +
2D Compatibility (PS) -21460 + (NN) -1620 + (LL) 3044
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -133918.0 ( -85.52 by residue)
QMean score : 0.455
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