Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTYKNPTLSQTIQGNTYDNPIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQPRMFRLLEDDALINRMGFNNIGMNKALSHLRKNAYQ--------VPVGINVGVNKMTPYEARYQDYIKVIDTFKHDVSFFTVNISSPNTENLQNFHDKDEF-SMLCQALTTFKKQHDVTVP-IYLKLTSDMDFDGLKALLPAITE-TFDGIILANTTRQR-DGLTSANKVEEGGLSGRPLFERNLKLIKYAYQQTNGEFLIIGTGGVFSTEDAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGIARYLKDHHFDNVSDIIGLDA
4JGD Chain:A ((44-387))-----------LDPESAHRLAV-------RFTSLGLLPRARFQDSD-MLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAA--EDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGAD-


General information:
TITO was launched using:
RESULT:

Template: 4JGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124780 for 3016 contacts (-41.4/contact) +
2D Compatibility (PS) -35942 + (NN) -24224 + (LL) 2024
1D Compatibility (HY) -19200 + (ID) 6350
Total energy: -208472.0 ( -69.12 by residue)
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_4JGD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JGD-query.scw
PDB file : Tito_Scwrl_4JGD.pdb: