Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKG-------------DKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
2OIE Chain:A ((13-106)) | -------------------------------------------------------------------------------------------------------EPTLEDIRRLHAEFAAERDWEQF------HQPRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQAVISK-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11016 for 476 contacts (-23.1/contact) +
2D Compatibility (PS) -8825 + (NN) -4528 + (LL) 7936
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -18583.0 ( -39.04 by residue)
QMean score : 0.504
|
|
|