Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLHFHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFKERYHNTEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS-FSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDS-QGFKILKSFSYEDYKNRN |
| 3MT1 Chain:A ((2-364)) | ------IETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF-GK---ETHAYS-VAYGDNEIDEVVSHADKIIFNSISQLERFADKA------------AGIARGLRLNPQ----------------RLGEWDVPK---VE-RVMDRINGFMIHNN--NKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRY-GVQIYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVLP----------------NEGSHSYMICGKSCLAGDVFGEFRFAE-ELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230333 for 2832 contacts (-81.3/contact) +
2D Compatibility (PS) -36655 + (NN) -10576 + (LL) 3548
1D Compatibility (HY) -24800 + (ID) 6100
Total energy: -304916.0 ( -107.67 by residue)
QMean score : 0.562
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