Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNYWTKLSI--------EYANQRSYLDDLFQVYPTIPEGLREIDSKIWSNVEYHFKRKDNLAL--ITELLNLDL-FPIKDSYMAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKD-----WINN-------------KSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGH-QNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRN----------YHIMSALVLREFLYQI---------------- |
| 4Q0W Chain:A ((1-362)) | GVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKA-VRDQNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKREDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQ-LLGSDYTNGLKGMGPVSSIEVIAEFGNLKNFKDWYNNGQFDKRKQETENKFEKDLRKKLVNNEIILDDDFPSVMVYDAYMRPEVDHDTTPFVWGVPDLDMLRSFMKTQLGWPHEKSDEILIPLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3209 for 1774 contacts (-1.8/contact) +
2D Compatibility (PS) -26443 + (NN) 1736 + (LL) -200
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -39816.0 ( -22.44 by residue)
QMean score : 0.091
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