Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3TJA Chain:D ((1-150))
MIIERLVGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSM--------------------
General information:
TITO was launched using:
RESULT:
Template:
3TJA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59627 for 1062 contacts (-56.1/contact) +
2D Compatibility (PS) -15536 + (NN) -1996 + (LL) 1172
1D Compatibility (HY) -22000 + (ID) 7400
Total energy: -105387.0 ( -99.23 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3TJA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJA-query.scw
PDB file :
Tito_Scwrl_3TJA.pdb
: