Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKT----KRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSIYFNYMINL |
2ERV Chain:A ((17-129)) | ----------------------------------------------------------------------------------YRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEGGD-----------EGAGKHSLSFAPVFVYEFAG-DS--IKPFIEAGIGVAAFSGT--R---VG-------------DQNLGSSLNFEDRIGAGLKFANG--QSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ERV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1660 for 754 contacts (-2.2/contact) +
2D Compatibility (PS) -11025 + (NN) -885 + (LL) 5088
1D Compatibility (HY) 0 + (ID) 800
Total energy: -9282.0 ( -12.31 by residue)
QMean score : 0.051
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