Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKR-YENFDNPKNPAPIFAL---NE----RLFVQELYHGPSLAFKDMALQPLASL-FSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFYAKKMGLNIAKIKVVTNSN-DVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH--------EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 3L6B Chain:A ((6-322)) | --------------------------------------------------------------DISFADVEKAHINIRDSI----HLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLV-----R--KPKAVVTHSSGNHGQALTYA-AKLEGIPAYIVVPQT-APDCKKLAIQAY-GA--SIVYCEPSDESRENVAKRVTEETE---G-----IMV--HPNQEPAVIAGQGTIALEVLNQVP--------LVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNL-YPPETIADGVKSSIGLNTWPIIRD----------------L---------------VDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSGGNVDLTSSITWVKQA--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113656 for 2848 contacts (-39.9/contact) +
2D Compatibility (PS) -32049 + (NN) -15630 + (LL) 13160
1D Compatibility (HY) -1600 + (ID) 2150
Total energy: -151925.0 ( -53.34 by residue)
QMean score : 0.314
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