Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMNVESFNLDHTKVKAPYVRIADRKKGVNGDLIVKYDVRFKQPNRDHMDMPSLHSLEHLVAEIIRNHA-NYVVDWSPMGCQTGFYLTVLNHD-NYTEILEVLEKTMQDVLKAKEVPASNEKQCGWAANHTLEGAQNLARAFLDKRAEWSEVGV
1QF6 Chain:A ((69-128))
--------------------------------------------------EIIRHSCAHLLGHAIKQLWPHTKMAIGPVI-DNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPG
General information:
TITO was launched using:
RESULT:
Template:
1QF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31090 for 337 contacts (-92.3/contact) +
2D Compatibility (PS) -6354 + (NN) -3930 + (LL) 3112
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -41062.0 ( -121.85 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_1QF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QF6-query.scw
PDB file :
Tito_Scwrl_1QF6.pdb
: