Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELF-EG-HAEFNMVKDFCSRVYELSEFLD-KKLQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELE-KEEECCGFGGTFSVKEPEISAVMVKEKI-KDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
| 4TR3 Chain:A ((1-188)) | ----------GIDPFTGQKLDFFK--------------QAHEGGPAPNSEVVRPDGFQSQR-ILDYAQGTRPLVLNFGSCTC-------PPFMARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVTTDSPYVIPQHRS-----LEDRVSAARVLQQGAPGCALVLDTMANSSSSAYGAYF-----ERLYVIQSGTIMYQGGRGPDGYQVSELRTWLERYDEQLHG----TRP------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24939 for 1270 contacts (19.6/contact) +
2D Compatibility (PS) -18035 + (NN) 5010 + (LL) 4896
1D Compatibility (HY) 4800 + (ID) 1000
Total energy: 20610.0 ( 16.23 by residue)
QMean score : 0.018
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