Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSFKLLNEGFESLRLPIIKAGLQRIA--TT---PIELNDEQMELTEKLLDRIEDDDDVVALYTNIE |
2FGC Chain:A ((40-101)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-DKTIEQIEKQAYKLVEVVKVTPIDP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16038 for 280 contacts (-57.3/contact) +
2D Compatibility (PS) -5710 + (NN) 1176 + (LL) 12372
1D Compatibility (HY) -800 + (ID) 300
Total energy: -9300.0 ( -33.21 by residue)
QMean score : 0.577
|
|
|