Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYFLEQTDSEIFEFIVEEFKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKRYYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKLYDKILGMDLSCGGHLTHGAKVSLTGKHYQSFSYGVGLDGY-IDYEEALKIAQSVKPQIIVCGFSAYPREIDFKKFREIADAVGALLLGDIAHVAGLVVANEHAHPFPHCHVVSSTTHKTLRGPRGGLILTNDEEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAKLVKSNMQVLAKTLKEKNHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRNPFVTSGIRIGSAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKTMANQFPVYHQPIF
1YJY Chain:A ((3-389))---YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHMTLRGPRGGMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEARQRVAALTD----------


General information:
TITO was launched using:
RESULT:

Template: 1YJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195919 for 3552 contacts (-55.2/contact) +
2D Compatibility (PS) -41976 + (NN) -20813 + (LL) 1512
1D Compatibility (HY) -31600 + (ID) 10850
Total energy: -299646.0 ( -84.36 by residue)
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_1YJY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YJY-query.scw
PDB file : Tito_Scwrl_1YJY.pdb: