Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
2NCK Chain:R ((4-137))
--ERTLSIIKPDGLEKGVIGKIISRFEEKGLKPVAIRLQHLSQAQAEGFYAVHKARPFFKDLVQFMISGPVVLMVLEGENAVLANRDIMGATNPAQAAEGTIRKDFATSIDKNTVHGSDSLENAKIEIAYFFRETEI
General information:
TITO was launched using:
RESULT:
Template:
2NCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58028 for 1029 contacts (-56.4/contact) +
2D Compatibility (PS) -14036 + (NN) -645 + (LL) 272
1D Compatibility (HY) -14800 + (ID) 4400
Total energy: -91637.0 ( -89.05 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_2NCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NCK-query.scw
PDB file :
Tito_Scwrl_2NCK.pdb
: