Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVFIKGLSLSVLLLFGVFLKASENTTLNPSNVSVEEQKRFGGVLVFARGADGSSMDPALVTDGESYV-ATGNIYDTLVQFKYGTTEVEPALATSWEISPDGLVYTFHLRKGVYFHQTKY-WNKKVEFSAKDVLFSFERQMDKAKRYYSPGAKSYKYWEG--MGMSHIIKSIEALDDYTIRFTLNGPEAPFLANLGMDFLSILSKDYADYLAQN-NKKDELAKKPVGTGPFKFFLWNKDEKIILVKNQDYWGPKAYLDKVVVRTIPNSSTRALALRTGEIMLMTGPNLNEVEQLEKLPNIVVDRSPGLIANWLSLNTQKKYFNNPLVRLAINHAINVDDYIKVIYEGFAQKMVNPFPPTIWGYNYNIKPYEYDLKKAKELLKQAGYPNGFKTTIFTT----S-T-RNPKGAVFIQASLAKIGIDVKIEVYEWGAYLKRTGLGEHEMAFAGWMADIADPDNFLYTLWSKQAASAIPTQNGSFYKSDAFSDLLIKAKRVSDQKEREALYLKAQEIIHKDAPYVPLAYPYSVVPHLSKVKGYKTTGVSVNRFFKVYLEK |
| 3TPA Chain:A ((8-513)) | -------------------------------------------NTLVNCIATAPMKLSPAITNDANDFNASSQQVYNRLVEFKAGKIEVEPGLAERWEISEDGLVYTFYLRQNVKFHSNKTFSPTR-PLNADDVVFSFQRQADKNHPYHN--VSAGTYFYFNWMNLPSILKSVEKVDDYTVKITLNKPNTPFITTVAMDFLSIYSKEYADQLLAQGKPETL-DQQPIGTGPFIFQTNQTDHAVRYTANVDYWKGKADIERLIFSITPDAGTRYAKLKAGECDVIDFPNISDIAQMKKDPQINLLEREGLNLAYIGLNTTKPELNNVKVRQALHHATDKKAIVDAVYQGGGTVATNPFPDAVLGYNPHLPQYEFNLEKAKALLAEAGYPNGFETEIWVQPVVRPSNPNPRRTAEIIQADWAKIGVKAKLVTHEWADFNKRTREGEFAAGTYGWTSRNGDPDNFLFPLFSQAN--I-PGTNYSRWTDEKFEALLASAAQIQDTQTRAKLYQQAVEIFQQNSPIIPFAHSINYVPLNKRVQGFVQNPFGYTAFYGVSLKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216547 for 4262 contacts (-50.8/contact) +
2D Compatibility (PS) -53510 + (NN) -29120 + (LL) 3336
1D Compatibility (HY) -32400 + (ID) 9400
Total energy: -337641.0 ( -79.22 by residue)
QMean score : 0.520
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