Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEILVAYGVDIDAVA--GWLGSYG---------------GEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEPMKMIVDAGHEVGAHGYSHENPIAMTAKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKH-GFKYDHSLMHNDFTPYFVRVGDSWSKIDYSLEAKDWMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMD--YAVFSMTIHPDVSARPQVLLMHEKIIEHINQHEGVRWVTFNEIADDFLKRNPRKK |
3S6O Chain:A ((30-311)) | -RARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGSRAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVELGHEIACHGWRWIHYQDMTPEREAEHMRLGMEAIERVTGVRPLGWYTGR--DSPNTHRLVAEYGGFLYDSDHYGD-DLPFWMDVEVSG------------------GASVPQLIVPYTLDANDMRFATP-------QGFNTADHFFHYLRDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVEIARHWREHHPY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134853 for 2174 contacts (-62.0/contact) +
2D Compatibility (PS) -27899 + (NN) -8977 + (LL) 1984
1D Compatibility (HY) -8400 + (ID) 3250
Total energy: -181395.0 ( -83.44 by residue)
QMean score : 0.492
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