Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNLEKKQEIIKAFATKANDTGSCEVQVALLNERIKLLTEHLKTNPKDHSSRLGLLKLVAQRRNLLKYIKRTDHVRYVVLIEKLGIKDR
1KUQ Chain:A ((4-87))
---CKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGI---
General information:
TITO was launched using:
RESULT:
Template:
1KUQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21984 for 508 contacts (-43.3/contact) +
2D Compatibility (PS) -9338 + (NN) -9113 + (LL) 616
1D Compatibility (HY) -6400 + (ID) 2450
Total energy: -48669.0 ( -95.81 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_1KUQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KUQ-query.scw
PDB file :
Tito_Scwrl_1KUQ.pdb
: