Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQ---NAPFDLFISADIARPKKL-YDEKITPFKE-------------------EVYAKGV-LVLWSENL-----KMDSLEILKDPKIK-RIAMANPKLAPYGKASMEVLDR-LK------LTPSLKSKIIYGASISQAHQFIATKNAQIGFGALSLIDK--K--D-K----NLSYFIIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEY-GYIVD |
| 1NNF Chain:A ((2-266)) | -----------------------ITVYNGQ-QKEAATAVAKAFEQE-TGIKVTLNSGKSEQLAGQLKEEGDKTPADVFYTEQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYVSTSG--AFLEQVVALSKMKGDKVALNWLKGLKENGKLYAKNSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVLKASKNQAEAQKFVDFLASKKGQEALVAARAEYPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123732 for 1740 contacts (-71.1/contact) +
2D Compatibility (PS) -23285 + (NN) -7334 + (LL) 2508
1D Compatibility (HY) -2000 + (ID) 1950
Total energy: -155793.0 ( -89.54 by residue)
QMean score : 0.571
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