Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDCAYKLLKKHVGIENYTLLDTACGNKEFLKLHHP---KKIGADIDPKCDALIINALAN---PK---RENYGI--SQ-----DEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLGISFLKSFAILKPAF-ICVLHPLSYLIK---EA---NFKQLK-LFKDHYRLLDAFVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
| 1QYR Chain:A ((18-199)) | -----------------NFLNDQFVIDSIVSAINPQ---KGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPL----M----------------------FHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENA---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69888 for 1161 contacts (-60.2/contact) +
2D Compatibility (PS) -16667 + (NN) -6480 + (LL) 6484
1D Compatibility (HY) -7600 + (ID) 850
Total energy: -95001.0 ( -81.83 by residue)
QMean score : 0.458
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