Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELGFN-EAERQKILDSNSSLIRNANEVRDKFIQNYAISLKDSNDPQDFLRRVQELRINMQKNF-ISFDTYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRKLNEIVQDIGTKYIILS-KNKTYLTSLERAKLITQLKLNLE
1MW5 Chain:A ((3-164))
-ETDLLMKVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNS----------------RSAFLHQLIAKLKSRHLQVL-----ELNKIGSEPLDLSNLP---------APFYVLLPESFAARITLLVQDKALPYVRVSME---YWHALE-------YKGELN
General information:
TITO was launched using:
RESULT:
Template:
1MW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27568 for 1018 contacts (-27.1/contact) +
2D Compatibility (PS) -16022 + (NN) 3051 + (LL) 2880
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -43259.0 ( -42.49 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_1MW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MW5-query.scw
PDB file :
Tito_Scwrl_1MW5.pdb
: