Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQLFLIIGAPGSGKTTDAELIAKNNSETIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKS--SSKGIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVSENTAKERVLGRS------------------------------RGADDNERVFHNRMRVFLDPLVEIQNFYKAKHLHKIINGERSIEEIVNEMQKYILSFAN
3TLX Chain:B ((32-237))
----YIFLGAPGSGKGTQSLNLKK--SHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFIL-DGYPRNVKQAEDLNKLL-QKNQTKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQREDDNEDVLKKRLTVFKSETSPLISYYKNKNL--LINLDAT--QPANDLEKKISQHID
General information:
TITO was launched using:
RESULT:
Template:
3TLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61975 for 1304 contacts (-47.5/contact) +
2D Compatibility (PS) -19247 + (NN) -12321 + (LL) 948
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -108395.0 ( -83.12 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3TLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TLX-query.scw
PDB file :
Tito_Scwrl_3TLX.pdb
: