Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMA-WGGLSSLEGASHFVIYLARKG-VTYDSDYVKKVMHEVKKRDYDTHSRFAQIIKNFQENDIKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTAE-FGVSVMASFGYRNQEITPKTRWKTEVIYEVIE
3GE6 Chain:A ((6-212))
-TATDFMEIVKGRRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEGKATLAPLAKFNQV-QVETSSAVIAVFGDMKAIDQLENIYDTAV-EKGLMPQEVRDRQVPAIQG----MYENVPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGM----E-KDRYVPVMLLSIGKAVDAGYPSVRLPINDIADWK-
General information:
TITO was launched using:
RESULT:
Template:
3GE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73095 for 1449 contacts (-50.4/contact) +
2D Compatibility (PS) -21814 + (NN) -5297 + (LL) 816
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -110190.0 ( -76.05 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3GE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE6-query.scw
PDB file :
Tito_Scwrl_3GE6.pdb
: